Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smarce1O54941 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 Gm18893-201ENSMUST00000198416 943 ntBASIC14.12□□□□□ -0.15
Smarce1O54941 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.12□□□□□ -0.15
Smarce1O54941 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smarce1O54941 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Smarce1O54941 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.12□□□□□ -0.15
Smarce1O54941 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarce1O54941 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.11□□□□□ -0.15
Smarce1O54941 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm25214-201ENSMUST00000104573 129 ntBASIC14.11□□□□□ -0.15
Smarce1O54941 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarce1O54941 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarce1O54941 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.11□□□□□ -0.15
Smarce1O54941 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.11□□□□□ -0.15
Smarce1O54941 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm9230-201ENSMUST00000188228 532 ntBASIC14.11□□□□□ -0.15
Smarce1O54941 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.11□□□□□ -0.15
Smarce1O54941 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm6013-201ENSMUST00000212264 699 ntBASIC14.11□□□□□ -0.15
Smarce1O54941 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarce1O54941 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Gm7046-201ENSMUST00000221351 977 ntBASIC14.11□□□□□ -0.15
Smarce1O54941 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.11□□□□□ -0.15
Smarce1O54941 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Smarce1O54941 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.11□□□□□ -0.15
Smarce1O54941 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarce1O54941 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarce1O54941 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Smarce1O54941 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smarce1O54941 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Smarce1O54941 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smarce1O54941 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Gm23931-201ENSMUST00000103842 109 ntBASIC14.1□□□□□ -0.15
Smarce1O54941 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarce1O54941 Gm11425-201ENSMUST00000119608 498 ntBASIC14.1□□□□□ -0.15
Smarce1O54941 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Smarce1O54941 Gm26956-201ENSMUST00000182176 986 ntBASIC14.1□□□□□ -0.15
Smarce1O54941 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarce1O54941 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Gm43002-201ENSMUST00000200310 155 ntBASIC14.1□□□□□ -0.15
Smarce1O54941 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.1□□□□□ -0.15
Smarce1O54941 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.1□□□□□ -0.15
Smarce1O54941 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms