Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm13981-201ENSMUST00000122360 447 ntBASIC12□□□□□ -0.49
Col4a6B1AVK5 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm10305-201ENSMUST00000195331 2475 ntBASIC12□□□□□ -0.49
Col4a6B1AVK5 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12□□□□□ -0.49
Col4a6B1AVK5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm42943-201ENSMUST00000199676 3242 ntBASIC12□□□□□ -0.49
Col4a6B1AVK5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm9133-201ENSMUST00000118289 540 ntBASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm13039-201ENSMUST00000118638 794 ntBASIC12□□□□□ -0.49
Col4a6B1AVK5 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12□□□□□ -0.49
Col4a6B1AVK5 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm45135-201ENSMUST00000206787 1184 ntBASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 AC162932.1-201ENSMUST00000219209 872 ntBASIC12□□□□□ -0.49
Col4a6B1AVK5 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col4a6B1AVK5 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col4a6B1AVK5 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.99□□□□□ -0.49
Col4a6B1AVK5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms