Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav6n-6A0A075B6B2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm21136-201ENSMUST00000186812 2575 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm6605-201ENSMUST00000031488 2574 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm13492-201ENSMUST00000119772 665 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm22121-201ENSMUST00000175148 54 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm5896-201ENSMUST00000189662 1024 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm18584-201ENSMUST00000203098 964 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm5904-201ENSMUST00000210286 865 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 AC166349.1-201ENSMUST00000220866 695 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm4935-201ENSMUST00000221316 1198 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 AC132317.1-201ENSMUST00000227227 962 ntBASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav6n-6A0A075B6B2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm6992-201ENSMUST00000217973 1607 ntBASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm37954-201ENSMUST00000195400 2071 ntBASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trav6n-6A0A075B6B2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Trav6n-6A0A075B6B2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Trav6n-6A0A075B6B2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trav6n-6A0A075B6B2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms