Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Speer3W4VSP1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Speer3W4VSP1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Speer3W4VSP1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.42□□□□□ -0.42
Speer3W4VSP1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm13813-201ENSMUST00000120998 787 ntBASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm13792-201ENSMUST00000121350 423 ntBASIC12.42□□□□□ -0.42
Speer3W4VSP1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Esd-ps-201ENSMUST00000170684 847 ntBASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gm6266-201ENSMUST00000203844 806 ntBASIC12.42□□□□□ -0.42
Speer3W4VSP1 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Mir339-201ENSMUST00000083659 96 ntBASIC12.42□□□□□ -0.42
Speer3W4VSP1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.42□□□□□ -0.42
Speer3W4VSP1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Speer3W4VSP1 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.41□□□□□ -0.42
Speer3W4VSP1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Gm9630-201ENSMUST00000178304 885 ntBASIC12.41□□□□□ -0.42
Speer3W4VSP1 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.41□□□□□ -0.42
Speer3W4VSP1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.41□□□□□ -0.42
Speer3W4VSP1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Speer3W4VSP1 Gm45885-202ENSMUST00000211520 1383 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms