Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf4Q9QZS2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rnf4Q9QZS2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Gm8213-201ENSMUST00000118191 441 ntBASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Gm12363-201ENSMUST00000122250 668 ntBASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Gm10156-201ENSMUST00000122364 462 ntBASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Gm10254-201ENSMUST00000052888 867 ntBASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.02□□□□□ -0.49
Rnf4Q9QZS2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Gm37497-201ENSMUST00000195830 798 ntBASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf4Q9QZS2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms