Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clcf1Q9QZM3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm23200-201ENSMUST00000104379 132 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm27627-201ENSMUST00000183644 150 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm29615-201ENSMUST00000185371 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm28224-201ENSMUST00000186078 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm29001-201ENSMUST00000186177 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm28292-201ENSMUST00000186593 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm28101-201ENSMUST00000187608 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm29076-201ENSMUST00000187689 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm28302-201ENSMUST00000187931 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm28646-201ENSMUST00000188220 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm28205-201ENSMUST00000189177 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm29032-201ENSMUST00000189797 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm28695-201ENSMUST00000190300 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm37448-201ENSMUST00000192795 697 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clcf1Q9QZM3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Clcf1Q9QZM3 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Clcf1Q9QZM3 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.67
Clcf1Q9QZM3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Clcf1Q9QZM3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Clcf1Q9QZM3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Clcf1Q9QZM3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms