Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
U2af1Q9D883 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
U2af1Q9D883 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
U2af1Q9D883 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
U2af1Q9D883 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
U2af1Q9D883 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
U2af1Q9D883 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Gm43365-201ENSMUST00000196522 2106 ntBASIC15.65■□□□□ 0.1
U2af1Q9D883 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.65■□□□□ 0.1
U2af1Q9D883 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.65■□□□□ 0.1
U2af1Q9D883 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.65■□□□□ 0.1
U2af1Q9D883 Gm15207-201ENSMUST00000119259 442 ntBASIC15.65■□□□□ 0.1
U2af1Q9D883 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.65■□□□□ 0.1
U2af1Q9D883 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
U2af1Q9D883 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
U2af1Q9D883 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.65■□□□□ 0.1
U2af1Q9D883 Gm44100-201ENSMUST00000204329 436 ntBASIC15.65■□□□□ 0.1
U2af1Q9D883 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.65■□□□□ 0.1
U2af1Q9D883 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
U2af1Q9D883 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
U2af1Q9D883 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
U2af1Q9D883 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.64■□□□□ 0.09
U2af1Q9D883 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Gm13045-201ENSMUST00000119019 712 ntBASIC15.64■□□□□ 0.09
U2af1Q9D883 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Gm9785-201ENSMUST00000062642 1006 ntBASIC15.64■□□□□ 0.09
U2af1Q9D883 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 AC093022.4-203ENSMUST00000228523 2657 ntBASIC15.64■□□□□ 0.09
U2af1Q9D883 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
U2af1Q9D883 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
U2af1Q9D883 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.63■□□□□ 0.09
U2af1Q9D883 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 AC108858.2-201ENSMUST00000228186 1425 ntBASIC15.63■□□□□ 0.09
U2af1Q9D883 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Ntng1-201ENSMUST00000051253 327 ntBASIC15.63■□□□□ 0.09
U2af1Q9D883 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.63■□□□□ 0.09
U2af1Q9D883 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
U2af1Q9D883 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 AC138329.2-201ENSMUST00000225579 1842 ntBASIC15.63■□□□□ 0.09
U2af1Q9D883 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.63■□□□□ 0.09
U2af1Q9D883 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
U2af1Q9D883 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
U2af1Q9D883 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms