Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim42Q9D2H5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 AC107452.3-201ENSMUST00000228807 1308 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gm23119-201ENSMUST00000158610 140 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gm18304-201ENSMUST00000189162 546 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gm28745-201ENSMUST00000190069 305 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.98□□□□□ -0.49
Trim42Q9D2H5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim42Q9D2H5 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Gm9083-201ENSMUST00000120423 819 ntBASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Gm44958-201ENSMUST00000203734 736 ntBASIC11.97□□□□□ -0.49
Trim42Q9D2H5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Gm8598-201ENSMUST00000221184 836 ntBASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.97□□□□□ -0.49
Trim42Q9D2H5 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms