Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ssu72Q9CY97 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Btrc-209ENSMUST00000224478 2194 ntBASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm13875-201ENSMUST00000120162 282 ntBASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm25261-201ENSMUST00000157416 134 ntBASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Ssu72Q9CY97 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.8□□□□□ -0.52
Ssu72Q9CY97 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Gm14832-201ENSMUST00000121289 322 ntBASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Gm5035-201ENSMUST00000215581 927 ntBASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ssu72Q9CY97 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.79□□□□□ -0.52
Ssu72Q9CY97 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms