Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Gm9996-201ENSMUST00000070359 913 ntBASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf135Q9CWS1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm17931-201ENSMUST00000208132 634 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm18212-201ENSMUST00000211678 889 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf135Q9CWS1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Gm5706-201ENSMUST00000181525 993 ntBASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.41□□□□□ -0.42
Rnf135Q9CWS1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms