Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
RTRAFQ9CQE8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm13616-201ENSMUST00000120600 222 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm15487-201ENSMUST00000122373 465 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm16296-201ENSMUST00000159905 325 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm24694-201ENSMUST00000180054 110 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm27702-201ENSMUST00000184512 56 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm27663-201ENSMUST00000184839 110 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
RTRAFQ9CQE8 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Gm22121-201ENSMUST00000175148 54 ntBASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Mir8102-201ENSMUST00000184148 139 ntBASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Gm6007-201ENSMUST00000208170 823 ntBASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 AC124732.1-201ENSMUST00000221551 910 ntBASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms