Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Mir1894-201ENSMUST00000122802 81 ntBASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Gm5706-201ENSMUST00000181525 993 ntBASIC10.74□□□□□ -0.69
Krt88Q9CPR6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Gm9136-201ENSMUST00000193368 454 ntBASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.74□□□□□ -0.69
Krt88Q9CPR6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Gm5356-201ENSMUST00000093326 615 ntBASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Krt88Q9CPR6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm24934-201ENSMUST00000103764 111 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm14127-201ENSMUST00000117906 678 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm11814-201ENSMUST00000119515 929 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm7029-201ENSMUST00000173226 450 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm27023-201ENSMUST00000182372 285 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Krt88Q9CPR6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms