Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Gm14999-201ENSMUST00000121039 624 ntBASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Gm8062-201ENSMUST00000139696 444 ntBASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Snora78-201ENSMUST00000158630 128 ntBASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim8Q99PJ2 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.71□□□□□ -0.54
Trim8Q99PJ2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim8Q99PJ2 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim8Q99PJ2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim8Q99PJ2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim8Q99PJ2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.71□□□□□ -0.54
Trim8Q99PJ2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim8Q99PJ2 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.71□□□□□ -0.54
Trim8Q99PJ2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim8Q99PJ2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim8Q99PJ2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.71□□□□□ -0.54
Trim8Q99PJ2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Mir1938-201ENSMUST00000158746 100 ntBASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.7□□□□□ -0.54
Trim8Q99PJ2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gm5781-201ENSMUST00000219792 443 ntBASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim8Q99PJ2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Gm37424-201ENSMUST00000191727 561 ntBASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms