Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Id2-203ENSMUST00000222667 958 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm17221-201ENSMUST00000163909 481 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm17073-201ENSMUST00000168069 556 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm6216-201ENSMUST00000182390 687 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Mir6934-201ENSMUST00000183965 62 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm44323-201ENSMUST00000198689 129 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm43866-201ENSMUST00000203894 839 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm5178-201ENSMUST00000219380 898 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Gm5468-202ENSMUST00000227851 682 ntBASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdh23Q99PF4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh23Q99PF4 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh23Q99PF4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh23Q99PF4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh23Q99PF4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh23Q99PF4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdh23Q99PF4 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.77□□□□□ -0.52
Cdh23Q99PF4 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Gm11952-201ENSMUST00000121172 821 ntBASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.77□□□□□ -0.53
Cdh23Q99PF4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Gm5982-201ENSMUST00000196234 512 ntBASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Gm31274-201ENSMUST00000197356 229 ntBASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Gm4903-201ENSMUST00000210462 405 ntBASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.77□□□□□ -0.53
Cdh23Q99PF4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Gm8111-201ENSMUST00000117659 987 ntBASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh23Q99PF4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms