Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip1Q922J3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip1Q922J3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clip1Q922J3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Clip1Q922J3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC18.55■□□□□ 0.56
Clip1Q922J3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm6771-201ENSMUST00000182716 1001 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Mir6407-201ENSMUST00000184510 101 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm19091-201ENSMUST00000208120 978 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Clip1Q922J3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm4900-201ENSMUST00000222046 1628 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm29100-201ENSMUST00000187564 4410 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm26047-201ENSMUST00000157308 113 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm24398-201ENSMUST00000157870 109 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Rn7s6-201ENSMUST00000175005 291 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm26047-202ENSMUST00000198840 115 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm17825-201ENSMUST00000206836 794 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Clip1Q922J3 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC18.55■□□□□ 0.56
Clip1Q922J3 AC174797.2-202ENSMUST00000225729 568 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Clip1Q922J3 n-R5s211-201ENSMUST00000093689 119 ntBASIC18.55■□□□□ 0.56
Clip1Q922J3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clip1Q922J3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Clip1Q922J3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Clip1Q922J3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC18.54■□□□□ 0.56
Clip1Q922J3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC18.54■□□□□ 0.56
Clip1Q922J3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC18.54■□□□□ 0.56
Clip1Q922J3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC18.54■□□□□ 0.56
Clip1Q922J3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC18.54■□□□□ 0.56
Clip1Q922J3 Gm29410-201ENSMUST00000188383 694 ntBASIC18.54■□□□□ 0.56
Clip1Q922J3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC18.54■□□□□ 0.56
Clip1Q922J3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC18.54■□□□□ 0.56
Clip1Q922J3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 CT573047.1-201ENSMUST00000223652 851 ntBASIC18.54■□□□□ 0.56
Clip1Q922J3 AC102368.1-201ENSMUST00000227161 892 ntBASIC18.54■□□□□ 0.56
Clip1Q922J3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clip1Q922J3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC18.54■□□□□ 0.56
Clip1Q922J3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC18.53■□□□□ 0.56
Clip1Q922J3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC18.53■□□□□ 0.56
Clip1Q922J3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clip1Q922J3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC18.53■□□□□ 0.56
Clip1Q922J3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clip1Q922J3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC18.53■□□□□ 0.56
Clip1Q922J3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clip1Q922J3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC18.53■□□□□ 0.56
Clip1Q922J3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clip1Q922J3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clip1Q922J3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip1Q922J3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Clip1Q922J3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clip1Q922J3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 103.2 ms