Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm8531-201ENSMUST00000188319 893 ntBASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm45575-201ENSMUST00000210283 548 ntBASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm3619-201ENSMUST00000219947 775 ntBASIC11.83□□□□□ -0.52
Vsx1Q91V10 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.83□□□□□ -0.52
Vsx1Q91V10 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.83□□□□□ -0.52
Vsx1Q91V10 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vsx1Q91V10 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vsx1Q91V10 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm13916-201ENSMUST00000117368 628 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm11354-201ENSMUST00000121974 422 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm4654-201ENSMUST00000183305 982 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm5100-201ENSMUST00000195631 589 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm18059-201ENSMUST00000208073 580 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm35713-201ENSMUST00000210516 199 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.82□□□□□ -0.52
Vsx1Q91V10 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx1Q91V10 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.81□□□□□ -0.52
Vsx1Q91V10 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Gm24231-201ENSMUST00000104315 133 ntBASIC11.81□□□□□ -0.52
Vsx1Q91V10 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Gm7541-201ENSMUST00000118361 535 ntBASIC11.81□□□□□ -0.52
Vsx1Q91V10 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vsx1Q91V10 Gm29410-201ENSMUST00000188383 694 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms