Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Gm32999-201ENSMUST00000192693 562 ntBASIC12.22□□□□□ -0.45
CopaQ8CIE6 Gm7003-201ENSMUST00000195089 312 ntBASIC12.22□□□□□ -0.45
CopaQ8CIE6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.22□□□□□ -0.45
CopaQ8CIE6 Nsd1-205ENSMUST00000224693 852 ntBASIC12.22□□□□□ -0.45
CopaQ8CIE6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.22□□□□□ -0.45
CopaQ8CIE6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopaQ8CIE6 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.21□□□□□ -0.45
CopaQ8CIE6 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Gm23200-201ENSMUST00000104379 132 ntBASIC12.21□□□□□ -0.45
CopaQ8CIE6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.21□□□□□ -0.45
CopaQ8CIE6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Gm45433-201ENSMUST00000209386 247 ntBASIC12.21□□□□□ -0.45
CopaQ8CIE6 Gm45598-202ENSMUST00000210719 986 ntBASIC12.21□□□□□ -0.45
CopaQ8CIE6 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.21□□□□□ -0.45
CopaQ8CIE6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopaQ8CIE6 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.21□□□□□ -0.45
CopaQ8CIE6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
CopaQ8CIE6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopaQ8CIE6 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.21□□□□□ -0.46
CopaQ8CIE6 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.2□□□□□ -0.46
CopaQ8CIE6 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms