Protein–RNA interactions for Protein: Q8CEQ0

Cdkl1, Cyclin-dependent kinase-like 1, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl1Q8CEQ0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cdkl1Q8CEQ0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm13296-201ENSMUST00000117854 997 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm14381-201ENSMUST00000122105 414 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm15276-201ENSMUST00000145953 498 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm38317-201ENSMUST00000195564 343 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm44364-201ENSMUST00000198368 141 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm43002-201ENSMUST00000200310 155 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm5705-201ENSMUST00000066241 711 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cdkl1Q8CEQ0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm22133-201ENSMUST00000102082 109 ntBASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm13665-201ENSMUST00000120830 528 ntBASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm20482-202ENSMUST00000174729 825 ntBASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm43630-201ENSMUST00000201550 776 ntBASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cdkl1Q8CEQ0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms