Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm25668-201ENSMUST00000157700 129 ntBASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm20482-202ENSMUST00000174729 825 ntBASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm37489-201ENSMUST00000191883 159 ntBASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm6621-201ENSMUST00000193251 772 ntBASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm43138-201ENSMUST00000199123 708 ntBASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vcpip1Q8CDG3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Nsd1-205ENSMUST00000224693 852 ntBASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Vcpip1Q8CDG3 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.81□□□□□ -0.36
Vcpip1Q8CDG3 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms