Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm27501-201ENSMUST00000183599 107 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Olfr284-202ENSMUST00000206647 966 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm9368-201ENSMUST00000219348 831 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lrif1Q8CDD9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm12363-201ENSMUST00000122250 668 ntBASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm13786-201ENSMUST00000122371 333 ntBASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm43822-201ENSMUST00000200285 476 ntBASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm8420-201ENSMUST00000097103 598 ntBASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lrif1Q8CDD9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm14723-201ENSMUST00000118686 215 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms