Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Gm4982-201ENSMUST00000160440 1098 ntBASIC16.65■□□□□ 0.26
Usp54Q8BL06 Gm17214-201ENSMUST00000164501 541 ntBASIC16.65■□□□□ 0.26
Usp54Q8BL06 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Gm9507-202ENSMUST00000180157 654 ntBASIC16.65■□□□□ 0.26
Usp54Q8BL06 Gm5342-201ENSMUST00000181982 1003 ntBASIC16.65■□□□□ 0.26
Usp54Q8BL06 Mir7035-201ENSMUST00000184713 82 ntBASIC16.65■□□□□ 0.26
Usp54Q8BL06 Gm37284-201ENSMUST00000193607 539 ntBASIC16.65■□□□□ 0.26
Usp54Q8BL06 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 AC115304.2-201ENSMUST00000226399 332 ntBASIC16.65■□□□□ 0.26
Usp54Q8BL06 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC16.65■□□□□ 0.26
Usp54Q8BL06 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.65■□□□□ 0.26
Usp54Q8BL06 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm15620-201ENSMUST00000122949 270 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm29763-201ENSMUST00000205306 616 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm45085-201ENSMUST00000209100 441 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 AC122891.1-201ENSMUST00000218671 268 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm5171-201ENSMUST00000214944 1415 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm9133-201ENSMUST00000118289 540 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm24328-201ENSMUST00000175104 67 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm18801-201ENSMUST00000186616 536 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm9916-201ENSMUST00000192943 1228 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Gm26670-202ENSMUST00000226862 340 ntBASIC16.64■□□□□ 0.25
Usp54Q8BL06 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Usp54Q8BL06 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC16.63■□□□□ 0.25
Usp54Q8BL06 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms