Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm11619-201ENSMUST00000117474 237 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm16219-201ENSMUST00000120096 274 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm24809-201ENSMUST00000175318 271 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Mir6941-201ENSMUST00000184711 59 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm18801-201ENSMUST00000186616 536 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm42655-201ENSMUST00000202782 1134 ntBASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trnp1Q80ZI1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm25492-201ENSMUST00000157383 129 ntBASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm6114-201ENSMUST00000182472 968 ntBASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm43752-201ENSMUST00000198475 697 ntBASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trnp1Q80ZI1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Gm12663-201ENSMUST00000118481 958 ntBASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Gm5909-201ENSMUST00000119768 1281 ntBASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Mir1905-201ENSMUST00000122779 82 ntBASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trnp1Q80ZI1 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms