Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup98Q6PFD9 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm12628-201ENSMUST00000122193 382 ntBASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm25554-201ENSMUST00000158075 113 ntBASIC13.82□□□□□ -0.2
Nup98Q6PFD9 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm16380-201ENSMUST00000077997 478 ntBASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup98Q6PFD9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup98Q6PFD9 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm5468-202ENSMUST00000227851 682 ntBASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.8□□□□□ -0.2
Nup98Q6PFD9 Gm28324-201ENSMUST00000187913 264 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms