Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Gm11511-201ENSMUST00000118146 540 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Gm18367-201ENSMUST00000176139 600 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Gm9507-202ENSMUST00000180157 654 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Gm18041-201ENSMUST00000218210 618 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc85bQ6PDY0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm22594-201ENSMUST00000104251 130 ntBASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm11578-201ENSMUST00000118530 459 ntBASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm15703-201ENSMUST00000120250 880 ntBASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm25116-201ENSMUST00000157191 122 ntBASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm18514-201ENSMUST00000218980 436 ntBASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc85bQ6PDY0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc85bQ6PDY0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Mir744-201ENSMUST00000103261 100 ntBASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Gm14942-201ENSMUST00000119642 336 ntBASIC12.45□□□□□ -0.42
Ccdc85bQ6PDY0 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms