Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Smarcd3Q6P9Z1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm6023-201ENSMUST00000118217 606 ntBASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Smarcd3Q6P9Z1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smarcd3Q6P9Z1 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms