Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Tpm1-213ENSMUST00000113697 1742 ntTSL 2 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Snord83b-201ENSMUST00000104546 94 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm13341-201ENSMUST00000120780 672 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm14381-201ENSMUST00000122105 414 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm7211-201ENSMUST00000172692 1118 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm27320-201ENSMUST00000184892 109 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm33112-201ENSMUST00000193971 699 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm43774-201ENSMUST00000196327 878 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm43118-201ENSMUST00000199149 775 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm43811-201ENSMUST00000202862 695 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Olfr284-202ENSMUST00000206647 966 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm45845-201ENSMUST00000207326 582 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 AC153801.1-201ENSMUST00000217904 947 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm32025-201ENSMUST00000217960 307 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm19309-201ENSMUST00000218295 205 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Cts7-204ENSMUST00000225321 1257 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.12□□□□□ -0.95
Foxc1Q61572 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.12□□□□□ -0.95
Foxc1Q61572 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Foxc1Q61572 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm15394-201ENSMUST00000119656 1308 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm37891-201ENSMUST00000195585 1326 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.11□□□□□ -0.95
Foxc1Q61572 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Foxc1Q61572 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Foxc1Q61572 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms