Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tnfaip3Q60769 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tnfaip3Q60769 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Mir5120-201ENSMUST00000175020 78 ntBASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Mir5132-201ENSMUST00000175166 71 ntBASIC11.27□□□□□ -0.61
Tnfaip3Q60769 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.27□□□□□ -0.61
Tnfaip3Q60769 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tnfaip3Q60769 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Gm18734-201ENSMUST00000172937 808 ntBASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Gm5706-201ENSMUST00000181525 993 ntBASIC11.26□□□□□ -0.61
Tnfaip3Q60769 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms