Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.38□□□□□ -0.59
Nr1h4Q60641 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm4984-201ENSMUST00000115987 360 ntBASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm12490-201ENSMUST00000120255 560 ntBASIC11.38□□□□□ -0.59
Nr1h4Q60641 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm13570-201ENSMUST00000140763 309 ntBASIC11.38□□□□□ -0.59
Nr1h4Q60641 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm7809-201ENSMUST00000153199 742 ntBASIC11.38□□□□□ -0.59
Nr1h4Q60641 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm42937-201ENSMUST00000197360 752 ntBASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.38□□□□□ -0.59
Nr1h4Q60641 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nr1h4Q60641 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.37□□□□□ -0.59
Nr1h4Q60641 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.37□□□□□ -0.59
Nr1h4Q60641 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.37□□□□□ -0.59
Nr1h4Q60641 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.37□□□□□ -0.59
Nr1h4Q60641 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.37□□□□□ -0.59
Nr1h4Q60641 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nr1h4Q60641 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms