Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm19287-201ENSMUST00000203190 358 ntBASIC13.91□□□□□ -0.18
Prdm1Q60636 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.91□□□□□ -0.18
Prdm1Q60636 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.91□□□□□ -0.18
Prdm1Q60636 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.91□□□□□ -0.18
Prdm1Q60636 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prdm1Q60636 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.91□□□□□ -0.18
Prdm1Q60636 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.9□□□□□ -0.18
Prdm1Q60636 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Pck2-205ENSMUST00000226352 2784 ntBASIC13.9□□□□□ -0.18
Prdm1Q60636 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Gm17040-202ENSMUST00000170597 889 ntBASIC13.9□□□□□ -0.18
Prdm1Q60636 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Gm9192-201ENSMUST00000183221 985 ntBASIC13.9□□□□□ -0.18
Prdm1Q60636 Rps4l-202ENSMUST00000204242 789 ntBASIC13.9□□□□□ -0.18
Prdm1Q60636 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.9□□□□□ -0.18
Prdm1Q60636 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Prdm1Q60636 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Prdm1Q60636 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
Prdm1Q60636 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Prdm1Q60636 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Prdm1Q60636 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Prdm1Q60636 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Gm25881-201ENSMUST00000157783 103 ntBASIC13.89□□□□□ -0.19
Prdm1Q60636 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Gm4310-201ENSMUST00000177847 889 ntBASIC13.89□□□□□ -0.19
Prdm1Q60636 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.89□□□□□ -0.19
Prdm1Q60636 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.89□□□□□ -0.19
Prdm1Q60636 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.89□□□□□ -0.19
Prdm1Q60636 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Prdm1Q60636 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Prdm1Q60636 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Prdm1Q60636 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prdm1Q60636 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prdm1Q60636 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.88□□□□□ -0.19
Prdm1Q60636 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prdm1Q60636 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.88□□□□□ -0.19
Prdm1Q60636 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Prdm1Q60636 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Prdm1Q60636 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.88□□□□□ -0.19
Prdm1Q60636 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Prdm1Q60636 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prdm1Q60636 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Prdm1Q60636 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms