Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim38Q5SZ99 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim38Q5SZ99 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim38Q5SZ99 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim38Q5SZ99 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim38Q5SZ99 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim38Q5SZ99 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm6114-201ENSMUST00000182472 968 ntBASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm32999-201ENSMUST00000192693 562 ntBASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm43630-201ENSMUST00000201550 776 ntBASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim38Q5SZ99 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm11511-201ENSMUST00000118146 540 ntBASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm14441-201ENSMUST00000121960 540 ntBASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm14381-201ENSMUST00000122105 414 ntBASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm38341-201ENSMUST00000195357 515 ntBASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm8956-201ENSMUST00000203939 825 ntBASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm44651-201ENSMUST00000207343 372 ntBASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim38Q5SZ99 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim38Q5SZ99 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms