Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.49□□□□□ -0.57
Vps13aQ5H8C4 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Vps13aQ5H8C4 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.49□□□□□ -0.57
Vps13aQ5H8C4 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.49□□□□□ -0.57
Vps13aQ5H8C4 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Vps13aQ5H8C4 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm4294-201ENSMUST00000105169 614 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm11952-201ENSMUST00000121172 821 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm23582-201ENSMUST00000158530 139 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Gm44323-201ENSMUST00000198689 129 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Vps13aQ5H8C4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Gm5468-202ENSMUST00000227851 682 ntBASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Gm15373-201ENSMUST00000121495 214 ntBASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Gm14829-201ENSMUST00000121499 1138 ntBASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Vps13aQ5H8C4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Vps13aQ5H8C4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms