Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SgcbP82349 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.69□□□□□ -0.7
SgcbP82349 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SgcbP82349 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.69□□□□□ -0.7
SgcbP82349 Gm38188-201ENSMUST00000192879 856 ntBASIC10.69□□□□□ -0.7
SgcbP82349 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SgcbP82349 AC129323.1-201ENSMUST00000216733 470 ntBASIC10.69□□□□□ -0.7
SgcbP82349 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SgcbP82349 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
SgcbP82349 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SgcbP82349 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.69□□□□□ -0.7
SgcbP82349 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.68□□□□□ -0.7
SgcbP82349 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.68□□□□□ -0.7
SgcbP82349 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.68□□□□□ -0.7
SgcbP82349 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.68□□□□□ -0.7
SgcbP82349 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.68□□□□□ -0.7
SgcbP82349 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Mir7677-201ENSMUST00000184226 67 ntBASIC10.68□□□□□ -0.7
SgcbP82349 Gm28450-201ENSMUST00000187349 638 ntBASIC10.68□□□□□ -0.7
SgcbP82349 Gm4607-201ENSMUST00000206649 577 ntBASIC10.68□□□□□ -0.7
SgcbP82349 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.68□□□□□ -0.7
SgcbP82349 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC10.68□□□□□ -0.7
SgcbP82349 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.68□□□□□ -0.7
SgcbP82349 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SgcbP82349 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm44863-201ENSMUST00000207613 1422 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcbP82349 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.67□□□□□ -0.7
SgcbP82349 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.67□□□□□ -0.7
SgcbP82349 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.67□□□□□ -0.7
SgcbP82349 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm15711-201ENSMUST00000118889 535 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Gm14247-201ENSMUST00000120950 237 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.67□□□□□ -0.7
SgcbP82349 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.67□□□□□ -0.7
SgcbP82349 Gm5616-201ENSMUST00000165252 384 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Gm8741-201ENSMUST00000174736 384 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SgcbP82349 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
SgcbP82349 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SgcbP82349 Gm43184-201ENSMUST00000197247 542 ntBASIC10.67□□□□□ -0.7
SgcbP82349 Gm18038-201ENSMUST00000197900 485 ntBASIC10.67□□□□□ -0.7
SgcbP82349 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.67□□□□□ -0.7
SgcbP82349 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms