Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pdx1P52946 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.78□□□□□ -0.52
Pdx1P52946 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pdx1P52946 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Pdx1P52946 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pdx1P52946 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Pdx1P52946 Gm11509-201ENSMUST00000117358 325 ntBASIC11.78□□□□□ -0.52
Pdx1P52946 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.78□□□□□ -0.52
Pdx1P52946 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pdx1P52946 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.78□□□□□ -0.52
Pdx1P52946 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pdx1P52946 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pdx1P52946 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdx1P52946 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pdx1P52946 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pdx1P52946 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.77□□□□□ -0.52
Pdx1P52946 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pdx1P52946 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdx1P52946 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pdx1P52946 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdx1P52946 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pdx1P52946 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pdx1P52946 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.77□□□□□ -0.52
Pdx1P52946 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pdx1P52946 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pdx1P52946 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdx1P52946 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.77□□□□□ -0.53
Pdx1P52946 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.77□□□□□ -0.53
Pdx1P52946 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.77□□□□□ -0.53
Pdx1P52946 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.77□□□□□ -0.53
Pdx1P52946 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Gm27530-201ENSMUST00000184096 98 ntBASIC11.77□□□□□ -0.53
Pdx1P52946 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.77□□□□□ -0.53
Pdx1P52946 Gm28071-201ENSMUST00000190355 478 ntBASIC11.77□□□□□ -0.53
Pdx1P52946 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.77□□□□□ -0.53
Pdx1P52946 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Gm5705-201ENSMUST00000066241 711 ntBASIC11.77□□□□□ -0.53
Pdx1P52946 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.77□□□□□ -0.53
Pdx1P52946 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pdx1P52946 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.77□□□□□ -0.53
Pdx1P52946 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.77□□□□□ -0.53
Pdx1P52946 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.77□□□□□ -0.53
Pdx1P52946 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdx1P52946 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.76□□□□□ -0.53
Pdx1P52946 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pdx1P52946 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Pdx1P52946 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.76□□□□□ -0.53
Pdx1P52946 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.76□□□□□ -0.53
Pdx1P52946 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdx1P52946 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms