Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rfx3P48381 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rfx3P48381 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rfx3P48381 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.79□□□□□ -0.68
Rfx3P48381 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rfx3P48381 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.79□□□□□ -0.68
Rfx3P48381 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rfx3P48381 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Rfx3P48381 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Rfx3P48381 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Rfx3P48381 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rfx3P48381 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Rfx3P48381 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.78□□□□□ -0.68
Rfx3P48381 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.78□□□□□ -0.68
Rfx3P48381 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Gm37489-201ENSMUST00000191883 159 ntBASIC10.78□□□□□ -0.68
Rfx3P48381 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rfx3P48381 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rfx3P48381 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rfx3P48381 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rfx3P48381 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Rfx3P48381 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfx3P48381 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfx3P48381 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfx3P48381 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfx3P48381 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Rfx3P48381 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfx3P48381 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfx3P48381 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rfx3P48381 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Rfx3P48381 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rfx3P48381 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.77□□□□□ -0.69
Rfx3P48381 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.77□□□□□ -0.69
Rfx3P48381 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Gm25043-201ENSMUST00000158604 212 ntBASIC10.77□□□□□ -0.69
Rfx3P48381 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Rfx3P48381 Gm27572-201ENSMUST00000183702 255 ntBASIC10.77□□□□□ -0.69
Rfx3P48381 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.77□□□□□ -0.69
Rfx3P48381 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.77□□□□□ -0.69
Rfx3P48381 Gm6013-201ENSMUST00000212264 699 ntBASIC10.77□□□□□ -0.69
Rfx3P48381 Gm10608-202ENSMUST00000213924 676 ntBASIC10.77□□□□□ -0.69
Rfx3P48381 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.77□□□□□ -0.69
Rfx3P48381 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rfx3P48381 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms