Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps4bP46467 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Vps4bP46467 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.12□□□□□ -0.47
Vps4bP46467 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Vps4bP46467 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.12□□□□□ -0.47
Vps4bP46467 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Vps4bP46467 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.11□□□□□ -0.47
Vps4bP46467 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Gm11793-201ENSMUST00000120433 981 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Gm13786-201ENSMUST00000122371 333 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Gm26956-201ENSMUST00000182176 986 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Gm29396-201ENSMUST00000185659 716 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps4bP46467 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.11□□□□□ -0.47
Vps4bP46467 Gm17931-201ENSMUST00000208132 634 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.11□□□□□ -0.47
Vps4bP46467 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.11□□□□□ -0.47
Vps4bP46467 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.11□□□□□ -0.47
Vps4bP46467 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Vps4bP46467 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Vps4bP46467 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps4bP46467 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Vps4bP46467 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps4bP46467 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps4bP46467 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.1□□□□□ -0.47
Vps4bP46467 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps4bP46467 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps4bP46467 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Vps4bP46467 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps4bP46467 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps4bP46467 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps4bP46467 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps4bP46467 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.1□□□□□ -0.47
Vps4bP46467 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.1□□□□□ -0.47
Vps4bP46467 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps4bP46467 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps4bP46467 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps4bP46467 Olfr284-202ENSMUST00000206647 966 ntBASIC12.1□□□□□ -0.47
Vps4bP46467 Gm6334-201ENSMUST00000207083 228 ntBASIC12.1□□□□□ -0.47
Vps4bP46467 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps4bP46467 Gm5363-201ENSMUST00000211927 938 ntBASIC12.1□□□□□ -0.47
Vps4bP46467 Gm10608-202ENSMUST00000213924 676 ntBASIC12.1□□□□□ -0.47
Vps4bP46467 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.1□□□□□ -0.47
Vps4bP46467 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.1□□□□□ -0.47
Vps4bP46467 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Vps4bP46467 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps4bP46467 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms