Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.5□□□□□ -0.57
Tnfsf4P43488 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.5□□□□□ -0.57
Tnfsf4P43488 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.5□□□□□ -0.57
Tnfsf4P43488 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.5□□□□□ -0.57
Tnfsf4P43488 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfsf4P43488 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Gm11531-201ENSMUST00000117614 555 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Gm43118-201ENSMUST00000199149 775 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.49□□□□□ -0.57
Tnfsf4P43488 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfsf4P43488 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm25214-201ENSMUST00000104573 129 ntBASIC11.48□□□□□ -0.57
Tnfsf4P43488 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm5419-201ENSMUST00000119301 527 ntBASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm11425-201ENSMUST00000119608 498 ntBASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfsf4P43488 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms