Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.79□□□□□ -0.84
VhlP40338 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.79□□□□□ -0.84
VhlP40338 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
VhlP40338 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.79□□□□□ -0.84
VhlP40338 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.79□□□□□ -0.84
VhlP40338 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
VhlP40338 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
VhlP40338 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.78□□□□□ -0.84
VhlP40338 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.78□□□□□ -0.84
VhlP40338 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.78□□□□□ -0.84
VhlP40338 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.78□□□□□ -0.84
VhlP40338 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.78□□□□□ -0.84
VhlP40338 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.78□□□□□ -0.84
VhlP40338 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.78□□□□□ -0.84
VhlP40338 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Gm4984-201ENSMUST00000115987 360 ntBASIC9.78□□□□□ -0.84
VhlP40338 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
VhlP40338 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
VhlP40338 Gm13570-201ENSMUST00000140763 309 ntBASIC9.78□□□□□ -0.84
VhlP40338 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC9.78□□□□□ -0.84
VhlP40338 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.78□□□□□ -0.84
VhlP40338 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.78□□□□□ -0.84
VhlP40338 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
VhlP40338 Gm29649-201ENSMUST00000185649 419 ntBASIC9.78□□□□□ -0.84
VhlP40338 Gm42937-201ENSMUST00000197360 752 ntBASIC9.78□□□□□ -0.84
VhlP40338 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Gm17931-201ENSMUST00000208132 634 ntBASIC9.78□□□□□ -0.84
VhlP40338 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
VhlP40338 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.78□□□□□ -0.84
VhlP40338 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.78□□□□□ -0.84
VhlP40338 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
VhlP40338 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.78□□□□□ -0.84
VhlP40338 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC9.78□□□□□ -0.84
VhlP40338 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC9.78□□□□□ -0.84
VhlP40338 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.78□□□□□ -0.84
VhlP40338 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
VhlP40338 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.77□□□□□ -0.84
VhlP40338 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VhlP40338 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.77□□□□□ -0.84
VhlP40338 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.77□□□□□ -0.84
VhlP40338 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
VhlP40338 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
VhlP40338 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
VhlP40338 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
VhlP40338 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
VhlP40338 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
VhlP40338 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.77□□□□□ -0.84
VhlP40338 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
VhlP40338 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms