Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.21□□□□□ -0.45
Mmp13P33435 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.21□□□□□ -0.45
Mmp13P33435 Gm25214-201ENSMUST00000104573 129 ntBASIC12.21□□□□□ -0.45
Mmp13P33435 Gm23912-201ENSMUST00000104687 87 ntBASIC12.21□□□□□ -0.45
Mmp13P33435 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Mmp13P33435 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Gm14999-201ENSMUST00000121039 624 ntBASIC12.21□□□□□ -0.45
Mmp13P33435 Gm15547-201ENSMUST00000122152 333 ntBASIC12.21□□□□□ -0.45
Mmp13P33435 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.21□□□□□ -0.45
Mmp13P33435 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Mmp13P33435 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Mmp13P33435 Gm25668-201ENSMUST00000157700 129 ntBASIC12.21□□□□□ -0.45
Mmp13P33435 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Mmp13P33435 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.21□□□□□ -0.45
Mmp13P33435 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.21□□□□□ -0.45
Mmp13P33435 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.21□□□□□ -0.45
Mmp13P33435 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.21□□□□□ -0.45
Mmp13P33435 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.21□□□□□ -0.45
Mmp13P33435 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Mmp13P33435 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.21□□□□□ -0.46
Mmp13P33435 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp13P33435 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Mmp13P33435 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Mmp13P33435 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp13P33435 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp13P33435 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp13P33435 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Mmp13P33435 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Mmp13P33435 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Mmp13P33435 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Mmp13P33435 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm23270-201ENSMUST00000104055 131 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm37259-201ENSMUST00000193903 849 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.2□□□□□ -0.46
Mmp13P33435 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm6082-201ENSMUST00000215204 454 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 Gm9257-201ENSMUST00000221254 232 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Mmp13P33435 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Mmp13P33435 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Mmp13P33435 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.2□□□□□ -0.46
Mmp13P33435 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Mmp13P33435 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.2□□□□□ -0.46
Mmp13P33435 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.19□□□□□ -0.46
Mmp13P33435 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Mmp13P33435 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Mmp13P33435 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.19□□□□□ -0.46
Mmp13P33435 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Mmp13P33435 Gm17376-201ENSMUST00000166016 84 ntBASIC12.19□□□□□ -0.46
Mmp13P33435 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms