Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.36□□□□□ -0.59
Slc6a11P31650 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Slc6a11P31650 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.36□□□□□ -0.59
Slc6a11P31650 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.36□□□□□ -0.59
Slc6a11P31650 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Slc6a11P31650 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Slc6a11P31650 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Slc6a11P31650 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Slc6a11P31650 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.35□□□□□ -0.59
Slc6a11P31650 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm24514-201ENSMUST00000174961 285 ntBASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm43378-201ENSMUST00000199336 582 ntBASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm43947-201ENSMUST00000203019 959 ntBASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm5904-201ENSMUST00000210286 865 ntBASIC11.35□□□□□ -0.59
Slc6a11P31650 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Slc6a11P31650 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Slc6a11P31650 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.35□□□□□ -0.59
Slc6a11P31650 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.35□□□□□ -0.59
Slc6a11P31650 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Gm12036-201ENSMUST00000120008 530 ntBASIC11.34□□□□□ -0.59
Slc6a11P31650 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Gm22334-201ENSMUST00000158070 133 ntBASIC11.34□□□□□ -0.59
Slc6a11P31650 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Gm8738-201ENSMUST00000172606 329 ntBASIC11.34□□□□□ -0.59
Slc6a11P31650 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.34□□□□□ -0.59
Slc6a11P31650 Mir6927-201ENSMUST00000184494 71 ntBASIC11.34□□□□□ -0.59
Slc6a11P31650 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.34□□□□□ -0.59
Slc6a11P31650 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.34□□□□□ -0.59
Slc6a11P31650 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a11P31650 Gm10076-201ENSMUST00000073238 384 ntBASIC11.34□□□□□ -0.59
Slc6a11P31650 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms