Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.83□□□□□ -0.68
VtnP29788 Gm5419-201ENSMUST00000119301 527 ntBASIC10.83□□□□□ -0.68
VtnP29788 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.83□□□□□ -0.68
VtnP29788 Gm5706-201ENSMUST00000181525 993 ntBASIC10.83□□□□□ -0.68
VtnP29788 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.83□□□□□ -0.68
VtnP29788 Gm27627-201ENSMUST00000183644 150 ntBASIC10.83□□□□□ -0.68
VtnP29788 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.83□□□□□ -0.68
VtnP29788 Gm43947-201ENSMUST00000203019 959 ntBASIC10.83□□□□□ -0.68
VtnP29788 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.83□□□□□ -0.68
VtnP29788 Gm4607-201ENSMUST00000206649 577 ntBASIC10.83□□□□□ -0.68
VtnP29788 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.83□□□□□ -0.68
VtnP29788 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.83□□□□□ -0.68
VtnP29788 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
VtnP29788 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Gm5455-201ENSMUST00000058710 715 ntBASIC10.83□□□□□ -0.68
VtnP29788 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
VtnP29788 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
VtnP29788 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.83□□□□□ -0.68
VtnP29788 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
VtnP29788 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
VtnP29788 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
VtnP29788 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.82□□□□□ -0.68
VtnP29788 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VtnP29788 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.82□□□□□ -0.68
VtnP29788 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.82□□□□□ -0.68
VtnP29788 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
VtnP29788 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
VtnP29788 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VtnP29788 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm11331-201ENSMUST00000119764 288 ntBASIC10.82□□□□□ -0.68
VtnP29788 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.82□□□□□ -0.68
VtnP29788 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Gm22334-201ENSMUST00000158070 133 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm29615-201ENSMUST00000185371 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm28224-201ENSMUST00000186078 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm29001-201ENSMUST00000186177 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm28292-201ENSMUST00000186593 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm28101-201ENSMUST00000187608 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm29076-201ENSMUST00000187689 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm28302-201ENSMUST00000187931 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm28646-201ENSMUST00000188220 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm28205-201ENSMUST00000189177 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm29032-201ENSMUST00000189797 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm28695-201ENSMUST00000190300 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Gm37448-201ENSMUST00000192795 697 ntBASIC10.82□□□□□ -0.68
VtnP29788 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.82□□□□□ -0.68
VtnP29788 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.82□□□□□ -0.68
VtnP29788 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.82□□□□□ -0.68
VtnP29788 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
VtnP29788 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.82□□□□□ -0.68
VtnP29788 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
VtnP29788 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
VtnP29788 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.81□□□□□ -0.68
VtnP29788 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.81□□□□□ -0.68
VtnP29788 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
VtnP29788 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
VtnP29788 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms