Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.29□□□□□ -0.44
Nfkb1P25799 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.29□□□□□ -0.44
Nfkb1P25799 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nfkb1P25799 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm15004-201ENSMUST00000119192 630 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm15610-201ENSMUST00000120584 195 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm11660-201ENSMUST00000120955 412 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nfkb1P25799 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.28□□□□□ -0.44
Nfkb1P25799 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nfkb1P25799 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.27□□□□□ -0.44
Nfkb1P25799 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Nfkb1P25799 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.27□□□□□ -0.44
Nfkb1P25799 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nfkb1P25799 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nfkb1P25799 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nfkb1P25799 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Nfkb1P25799 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Nfkb1P25799 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nfkb1P25799 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.27□□□□□ -0.45
Nfkb1P25799 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Nfkb1P25799 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Gm13809-201ENSMUST00000117921 597 ntBASIC12.27□□□□□ -0.45
Nfkb1P25799 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Mir6546-201ENSMUST00000184460 62 ntBASIC12.27□□□□□ -0.45
Nfkb1P25799 Gm3508-201ENSMUST00000186012 792 ntBASIC12.27□□□□□ -0.45
Nfkb1P25799 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.27□□□□□ -0.45
Nfkb1P25799 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.27□□□□□ -0.45
Nfkb1P25799 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.27□□□□□ -0.45
Nfkb1P25799 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.27□□□□□ -0.45
Nfkb1P25799 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Nfkb1P25799 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nfkb1P25799 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.27□□□□□ -0.45
Nfkb1P25799 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nfkb1P25799 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.26□□□□□ -0.45
Nfkb1P25799 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nfkb1P25799 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms