Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.28□□□□□ -0.6
ApoeP08226 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.28□□□□□ -0.6
ApoeP08226 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.28□□□□□ -0.6
ApoeP08226 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.28□□□□□ -0.6
ApoeP08226 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.28□□□□□ -0.6
ApoeP08226 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.28□□□□□ -0.6
ApoeP08226 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.28□□□□□ -0.6
ApoeP08226 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
ApoeP08226 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
ApoeP08226 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.28□□□□□ -0.6
ApoeP08226 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.28□□□□□ -0.6
ApoeP08226 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
ApoeP08226 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
ApoeP08226 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
ApoeP08226 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ApoeP08226 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
ApoeP08226 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.27□□□□□ -0.6
ApoeP08226 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ApoeP08226 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
ApoeP08226 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ApoeP08226 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
ApoeP08226 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
ApoeP08226 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.27□□□□□ -0.61
ApoeP08226 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Gm15610-201ENSMUST00000120584 195 ntBASIC11.27□□□□□ -0.61
ApoeP08226 Gm14999-201ENSMUST00000121039 624 ntBASIC11.27□□□□□ -0.61
ApoeP08226 Gm14441-201ENSMUST00000121960 540 ntBASIC11.27□□□□□ -0.61
ApoeP08226 Rprl1-201ENSMUST00000158050 327 ntBASIC11.27□□□□□ -0.61
ApoeP08226 Gm8738-201ENSMUST00000172606 329 ntBASIC11.27□□□□□ -0.61
ApoeP08226 Gm5866-201ENSMUST00000177881 973 ntBASIC11.27□□□□□ -0.61
ApoeP08226 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.27□□□□□ -0.61
ApoeP08226 Gm9908-201ENSMUST00000211534 448 ntBASIC11.27□□□□□ -0.61
ApoeP08226 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.27□□□□□ -0.61
ApoeP08226 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
ApoeP08226 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
ApoeP08226 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.26□□□□□ -0.61
ApoeP08226 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.26□□□□□ -0.61
ApoeP08226 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
ApoeP08226 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
ApoeP08226 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms