Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.11□□□□□ -0.47
PdgfrbP05622 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.11□□□□□ -0.47
PdgfrbP05622 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.11□□□□□ -0.47
PdgfrbP05622 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.11□□□□□ -0.47
PdgfrbP05622 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdgfrbP05622 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PdgfrbP05622 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.1□□□□□ -0.47
PdgfrbP05622 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.1□□□□□ -0.47
PdgfrbP05622 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Gm12813-201ENSMUST00000119615 902 ntBASIC12.1□□□□□ -0.47
PdgfrbP05622 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.1□□□□□ -0.47
PdgfrbP05622 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.1□□□□□ -0.47
PdgfrbP05622 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.1□□□□□ -0.47
PdgfrbP05622 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.1□□□□□ -0.47
PdgfrbP05622 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdgfrbP05622 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.1□□□□□ -0.47
PdgfrbP05622 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
PdgfrbP05622 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
PdgfrbP05622 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
PdgfrbP05622 Gm13296-201ENSMUST00000117854 997 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Gm25890-201ENSMUST00000177643 165 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 Gm22614-201ENSMUST00000178300 165 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.09□□□□□ -0.47
PdgfrbP05622 Gm4607-201ENSMUST00000206649 577 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.09□□□□□ -0.47
PdgfrbP05622 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.09□□□□□ -0.47
PdgfrbP05622 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.09□□□□□ -0.47
PdgfrbP05622 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdgfrbP05622 Gm22042-201ENSMUST00000082989 165 ntBASIC12.09□□□□□ -0.47
PdgfrbP05622 Gm26110-201ENSMUST00000083971 165 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms