Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pdlim1O70400 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pdlim1O70400 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Gm17040-202ENSMUST00000170597 889 ntBASIC11.82□□□□□ -0.52
Pdlim1O70400 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.82□□□□□ -0.52
Pdlim1O70400 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pdlim1O70400 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.82□□□□□ -0.52
Pdlim1O70400 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pdlim1O70400 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.82□□□□□ -0.52
Pdlim1O70400 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.82□□□□□ -0.52
Pdlim1O70400 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.82□□□□□ -0.52
Pdlim1O70400 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pdlim1O70400 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm23596-201ENSMUST00000104304 132 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm14028-201ENSMUST00000117434 479 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm14208-201ENSMUST00000119645 678 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm12997-201ENSMUST00000120207 640 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm14277-201ENSMUST00000121195 360 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm24990-201ENSMUST00000157406 323 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm9192-201ENSMUST00000183221 985 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm9136-201ENSMUST00000193368 454 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Pdlim1O70400 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.81□□□□□ -0.52
Pdlim1O70400 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pdlim1O70400 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pdlim1O70400 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.81□□□□□ -0.52
Pdlim1O70400 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.8□□□□□ -0.52
Pdlim1O70400 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.8□□□□□ -0.52
Pdlim1O70400 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms