Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Mir453-201ENSMUST00000104732 82 ntBASIC11.22□□□□□ -0.61
Colca2F8VPY8 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Gm15329-201ENSMUST00000121408 155 ntBASIC11.22□□□□□ -0.61
Colca2F8VPY8 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Gm44216-201ENSMUST00000203942 157 ntBASIC11.22□□□□□ -0.61
Colca2F8VPY8 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.22□□□□□ -0.61
Colca2F8VPY8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Colca2F8VPY8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm11957-201ENSMUST00000118304 779 ntBASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.21□□□□□ -0.61
Colca2F8VPY8 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm12906-201ENSMUST00000154610 441 ntBASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm37284-201ENSMUST00000193607 539 ntBASIC11.21□□□□□ -0.61
Colca2F8VPY8 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.21□□□□□ -0.61
Colca2F8VPY8 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.21□□□□□ -0.61
Colca2F8VPY8 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Colca2F8VPY8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Colca2F8VPY8 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.21□□□□□ -0.62
Colca2F8VPY8 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.2□□□□□ -0.62
Colca2F8VPY8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Grk6-205ENSMUST00000224653 2976 ntBASIC11.2□□□□□ -0.62
Colca2F8VPY8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Gm13981-201ENSMUST00000122360 447 ntBASIC11.2□□□□□ -0.62
Colca2F8VPY8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.2□□□□□ -0.62
Colca2F8VPY8 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Colca2F8VPY8 Gm34379-201ENSMUST00000195036 290 ntBASIC11.2□□□□□ -0.62
Colca2F8VPY8 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.2□□□□□ -0.62
Colca2F8VPY8 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.2□□□□□ -0.62
Colca2F8VPY8 Gm45085-201ENSMUST00000209100 441 ntBASIC11.2□□□□□ -0.62
Colca2F8VPY8 Gm14005-208ENSMUST00000223654 681 ntBASIC11.2□□□□□ -0.62
Colca2F8VPY8 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms