Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm11244-201ENSMUST00000121243 237 ntBASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm9089-201ENSMUST00000122027 526 ntBASIC14.28□□□□□ -0.12
Ube4aE9Q735 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm17877-201ENSMUST00000192578 814 ntBASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm44158-201ENSMUST00000203881 505 ntBASIC14.28□□□□□ -0.12
Ube4aE9Q735 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.28□□□□□ -0.12
Ube4aE9Q735 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ube4aE9Q735 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.28□□□□□ -0.12
Ube4aE9Q735 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ube4aE9Q735 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ube4aE9Q735 Gm11628-201ENSMUST00000117568 171 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gm15615-201ENSMUST00000118876 198 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gm22442-201ENSMUST00000157256 144 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gm25072-201ENSMUST00000175233 235 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gm28324-201ENSMUST00000187913 264 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gm44315-201ENSMUST00000203041 219 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 CT025553.1-201ENSMUST00000226292 299 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4aE9Q735 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.27□□□□□ -0.13
Ube4aE9Q735 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ube4aE9Q735 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms