Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm12314-201ENSMUST00000118104 538 ntBASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm13342-201ENSMUST00000121055 207 ntBASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm11597-201ENSMUST00000121423 964 ntBASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm42693-201ENSMUST00000196779 631 ntBASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm7046-201ENSMUST00000221351 977 ntBASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Gm28043E0CXC2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Gm43630-201ENSMUST00000201550 776 ntBASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Olfr284-202ENSMUST00000206647 966 ntBASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Gm24136-201ENSMUST00000083374 165 ntBASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Gm28043E0CXC2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Gm28043E0CXC2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms