Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm12712-201ENSMUST00000120676 801 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm26272-201ENSMUST00000179241 132 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm37284-201ENSMUST00000193607 539 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Col4a6B1AVK5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.03□□□□□ -0.48
Col4a6B1AVK5 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col4a6B1AVK5 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Col4a6B1AVK5 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col4a6B1AVK5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col4a6B1AVK5 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col4a6B1AVK5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gm22594-201ENSMUST00000104251 130 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Snord23-201ENSMUST00000116828 109 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gm44814-201ENSMUST00000207018 434 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Id2-203ENSMUST00000222667 958 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 AC115304.2-201ENSMUST00000226399 332 ntBASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col4a6B1AVK5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm11957-201ENSMUST00000118304 779 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm25830-201ENSMUST00000158923 132 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Olfml3-204ENSMUST00000169286 874 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm25998-201ENSMUST00000175397 53 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm9162-201ENSMUST00000182081 991 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm5267-201ENSMUST00000191574 1045 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm42511-201ENSMUST00000196160 234 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm43506-201ENSMUST00000200675 753 ntBASIC12.01□□□□□ -0.49
Col4a6B1AVK5 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.01□□□□□ -0.49
Col4a6B1AVK5 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms