Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Gm26013-201ENSMUST00000104404 119 ntBASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Gm9139-201ENSMUST00000218817 700 ntBASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scn3aA2ASI5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm14892-201ENSMUST00000117636 267 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm15549-201ENSMUST00000121595 622 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm37028-201ENSMUST00000194276 107 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm3793-201ENSMUST00000204973 672 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm17825-201ENSMUST00000206836 794 ntBASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Scn3aA2ASI5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm5100-201ENSMUST00000195631 589 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm42518-201ENSMUST00000196277 938 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm3619-201ENSMUST00000219947 775 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Gm19009-201ENSMUST00000223072 823 ntBASIC13.17□□□□□ -0.3
Scn3aA2ASI5 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms