Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav12d-1A0N8R0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav12d-1A0N8R0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav12d-1A0N8R0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav12d-1A0N8R0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav12d-1A0N8R0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav12d-1A0N8R0 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav12d-1A0N8R0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav12d-1A0N8R0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Gm25261-201ENSMUST00000157416 134 ntBASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Gm40466-201ENSMUST00000212174 422 ntBASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav12d-1A0N8R0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Gm5419-201ENSMUST00000119301 527 ntBASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Gm13875-201ENSMUST00000120162 282 ntBASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Gm12490-201ENSMUST00000120255 560 ntBASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Gm9299-201ENSMUST00000206392 1140 ntBASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav12d-1A0N8R0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms